ibllib.io.extractors.training_trials

Classes

`Choice`	Get the subject's choice in every trial.
`ContrastLR`	Get left and right contrasts from raw datafile.
`ErrorCueTriggerTimes`
`FeedbackTimes`	Get the times the water or error tone was delivered to the animal.
`FeedbackType`	Get the feedback that was delivered to subject.
`GoCueTimes`	Get trigger times of goCue from state machine.
`GoCueTriggerTimes`	Get trigger times of goCue from state machine.
`IncludedTrials`
`Intervals`	Trial start to trial end.
`ItiDuration`	Calculate duration of iti from state timestamps.
`ItiInTimes`
`PauseDuration`	Extract pause duration from raw trial data.
`PhasePosQuiescence`	Extract stimulus phase, position and quiescence from Bpod data.
`ProbabilityLeft`
`RepNum`	Count the consecutive repeated trials.
`ResponseTimes`	Time (in absolute seconds from session start) when a response was recorded.
`RewardVolume`	Load reward volume delivered for each trial.
`StimFreezeTriggerTimes`
`StimOffTriggerTimes`
`StimOnOffFreezeTimes`	Extracts stim on / off and freeze times from Bpod BNC1 detected fronts.
`StimOnTimes_deprecated`
`StimOnTriggerTimes`
`TrainingTrials`
`TrialType`
`TrialsTable`	Extracts the following into a table from Bpod raw data:

class TrainingTrials(session_path=None)[source]

Bases: BaseBpodTrialsExtractor

save_names = ('_ibl_trials.repNum.npy', '_ibl_trials.goCueTrigger_times.npy', '_ibl_trials.stimOnTrigger_times.npy', None, '_ibl_trials.stimOffTrigger_times.npy', None, None, '_ibl_trials.table.pqt', '_ibl_trials.stimOff_times.npy', None, '_ibl_wheel.timestamps.npy', '_ibl_wheel.position.npy', '_ibl_wheelMoves.intervals.npy', '_ibl_wheelMoves.peakAmplitude.npy', None, None, None, None, '_ibl_trials.quiescencePeriod.npy', None)

The filenames of each extracted dataset, or None if array should not be saved.

Type:: tuple of str

var_names = ('repNum', 'goCueTrigger_times', 'stimOnTrigger_times', 'itiIn_times', 'stimOffTrigger_times', 'stimFreezeTrigger_times', 'errorCueTrigger_times', 'table', 'stimOff_times', 'stimFreeze_times', 'wheel_timestamps', 'wheel_position', 'wheelMoves_intervals', 'wheelMoves_peakAmplitude', 'wheelMoves_peakVelocity_times', 'is_final_movement', 'phase', 'position', 'quiescence', 'pause_duration')

A list of names for the extracted variables. These become the returned output keys.

Type:: tuple of str