iblatlas.genes
Gene expression maps.
Functions
Reads in the Allen gene expression experiments binary data. |
- allen_gene_expression(filename='gene-expression.pqt', folder_cache=None)[source]
Reads in the Allen gene expression experiments binary data.
- Parameters:
filename –
folder_cache –
- Returns:
a dataframe of experiments, where each record corresponds to a single gene expression
and a memmap of all experiments volumes, size (4345, 58, 41, 67) corresponding to (nexperiments, ml, dv, ap). The spacing between slices is 200 um