Welcome to IBL code library documentation!

Overview of Data Architecture

• IBL data structure

Installation

• Installation
  • Unified Environment

Using ONE to access IBL Data

• ONE
  • Introduction to ONE
  • Setting up ONE credentials
  • ONE basic commands
  • ONE Introductory Tutorial
  • ONE advanced queries
  • ONE Reference
  • Accessing data with ONE light
  • ONE Matlab Installation Guide
  • ONE Tutorial Matlab

Using Datajoint to access IBL Data

• Datajoint
  • Introduction to Datajoint
  • Setting up Datajoint credentials
  • Exploring the IBL Data Pipeline
  • Datajoint Introductory Tutorial

Tutorials

• Tutorials

Examples

• Examples
  • Behaviour
  • Ephys
  • ONE
  • Histology
  • Video

Publically Available Data

• IBL Public Data
  • Publically available IBL data
  • Accessing public data with ONE
  • Exploring the public IBL data with ONE
  • Accessing public data with Datajoint

Contribution Statement

• Contribution Statement
  • Code
    • Linting
    • Testing
    • Continuous Integration
  • Contributions and releases
    • Contributions and code review
      • Practical tips:
    • Branching model: gitflow
    • Releasing scheme: semantic versioning

API

• API Reference
  • alf
  • ibllib
  • oneibl
  • brainbox

• Index