iblrig.tools.call_bonsai
- iblrig.tools.call_bonsai(workflow_file, parameters=None, start=True, debug=False, bootstrap=True, editor=True, wait=True, check=False)[source]
Execute a Bonsai workflow within a subprocess call.
- Parameters:
workflow_file (
str | Path
) – Path to the Bonsai workflow file.parameters (
dict[str
,str]
, optional) – Parameters to be passed to Bonsai workflow.start (
bool
, optional) – Start execution of the workflow within Bonsai (default is True).debug (
bool
, optional) – Enable debugging mode if True (default is False). Only applies if editor is True.bootstrap (
bool
, optional) – Enable Bonsai bootstrapping if True (default is True).editor (
bool
, optional) – Enable Bonsai editor if True (default is True).wait (
bool
, optional) – Wait for Bonsai process to finish (default is True).check (
bool
, optional) – Raise CalledProcessError if Bonsai process exits with non-zero exit code (default is False). Only applies if wait is True.
- Returns:
Pointer to the Bonsai subprocess if wait is False, otherwise subprocess.CompletedProcess.
- Return type:
Popen[bytes] | Popen[str | bytes | Any] | CompletedProcess
- Raises:
FileNotFoundError – If the Bonsai executable does not exist. If the specified workflow file does not exist.
- Parameters: