IBL Alignment GUI

Contents:

  • Installation
  • Getting Started
  • Usage
  • Multi-Shank Data
  • Data Preparation
  • Datasets
  • Plugins
  • Keyboard Shortcuts
  • Channel Prediction
  • API Reference
  • Developer Guide
  • Changelog
IBL Alignment GUI
  • Overview: module code

All modules for which code is available

  • ibl_alignment_gui.app.controllers.app_controller
  • ibl_alignment_gui.app.controllers.shank_controller
  • ibl_alignment_gui.app.load_worker
  • ibl_alignment_gui.app.main
  • ibl_alignment_gui.app.views.app_view
  • ibl_alignment_gui.app.views.shank_view
  • ibl_alignment_gui.app.widgets.custom_widgets
  • ibl_alignment_gui.backends.allen.anatomical_atlas
  • ibl_alignment_gui.backends.allen.docdb_api
  • ibl_alignment_gui.core.ephys_alignment
  • ibl_alignment_gui.handlers.alignment_handler
  • ibl_alignment_gui.handlers.probe_handler
  • ibl_alignment_gui.handlers.shank_handler
  • ibl_alignment_gui.loaders.alignment_loader
  • ibl_alignment_gui.loaders.alignment_uploader
  • ibl_alignment_gui.loaders.data_loader
  • ibl_alignment_gui.loaders.geometry_loader
  • ibl_alignment_gui.loaders.histology_loader
  • ibl_alignment_gui.loaders.plot_loader
  • ibl_alignment_gui.loaders.transform_loader
  • ibl_alignment_gui.plugins.add_plugins
  • ibl_alignment_gui.plugins.additional_plots
  • ibl_alignment_gui.plugins.allen.additional_plots_allen
  • ibl_alignment_gui.plugins.allen.custom_filters
  • ibl_alignment_gui.plugins.channel_prediction
  • ibl_alignment_gui.plugins.cluster_features
  • ibl_alignment_gui.plugins.datoviz_3d
  • ibl_alignment_gui.plugins.ephys_atlas.inference
  • ibl_alignment_gui.plugins.ephys_features
  • ibl_alignment_gui.plugins.qc_dialog
  • ibl_alignment_gui.plugins.range_controller
  • ibl_alignment_gui.plugins.upload_dialog
  • ibl_alignment_gui.utils.helpers
  • ibl_alignment_gui.utils.optional
  • ibl_alignment_gui.utils.parse_yaml

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