Changelog

All notable changes to this project will be documented in this file.

The format is based on Keep a Changelog, and this project adheres to Semantic Versioning.

[0.1.0a1] - 2026-08-21

Channel prediction plugin, to predict channel location using inference or spatial encoding models (available by installing with ephysatlas extra).
Allen workflow for performing alignments in imaging space and reading and writing alignments to the Allen DocDB (available by installing with allen extra).
Save Progress (Shift+S), so an alignment that has not been uploaded can be recovered.
Region Plots menu (Alt+5) offering different region mappings.
Plots - raw LF plots, feature plots (with ephysatlas extra) and region plots (with ephysatlas extra).
Loading an insertion directly by id, with alignment-gui-ibl -p <pid>.
Documentation for the Channel Prediction plugin, the datasets and the keyboard shortcuts.

The package was reorganised: imports of app.app_controller, app.app_view, utils.utils and plugins.features_3d must be updated.
ibllib is now optional, installed with the ibl extra; offline mode runs without it.
3D viewer now uses ibl-datoviz as the backend
Data loading and plot building run on a background thread, with a progress dialog.

Probes read from were randomly ordered, now they are sorted alphabetically by name.
Sessions with no histology path in the YAML failed to load. Interpret as a session with no additional histology volumes.

The offset button has been removed, the same functionality can be achieved using a fit with a single reference line.