IBL Alignment GUI
A PyQt GUI for aligning electrophysiology recordings using anatomical landmarks. Electrophysiology features recorded along a probe are aligned to the brain regions along its histology track, to locate each recording channel in the brain.
New to the GUI? Start with Installation, then the first tutorial.
Tutorials
Step-by-step lessons on the sample data, from your first alignment to preparing your own recordings.
How-to guides
Recipes for specific tasks with your own data: converting recordings, writing session files, running the region prediction models.
Explanation
How alignment works, coordinate systems and the prediction models.
Reference
Datasets, session YAML keys, keyboard shortcuts, menus, command-line options and the Python API.