Index

A

actions() (RestScheme method) (RestSchemeCoreApi method) (RestSchemeOpenApi method) add_endpoint() (Globus method) alf_parts (PureALFPath property) AlfBunch (class in one.alf.io) ALFError ALFInvalid ALFMultipleCollectionsFound ALFMultipleObjectsFound ALFMultipleRevisionsFound ALFObjectNotFound

ALFPath (class in one.alf.path) ALFWarning alyx (OneAlyx property) (TestREST attribute) ALYX_JSON (in module one.remote.base), [1] AlyxClient (class in one.webclient) AlyxSubjectNotFound append() (AlfBunch method) as_globus_path() (in module one.remote.globus) assert_exists() (RegistrationClient method) attribute (PureALFPath property) authenticate() (AlyxClient method) autocomplete() (in module one.util)

B

backend (RestSchemeCoreApi attribute) (RestSchemeOpenApi attribute)

base_url (AlyxClient attribute)

C

cache_dir (AlyxClient property) (OneAlyx property) CACHE_DIR_DEFAULT (in module one.params), [1] caches_str2int() (in module one.tests.util) check_cache_conflict() (in module one.params) check_dimensions (AlfBunch property) check_dimensions() (in module one.alf.io) check_protected_files() (RegistrationClient method) clear_rest_cache() (AlyxClient method)

CLIENT_KEY (in module one.remote.globus) collection (PureALFPath property) COLLECTION_SPEC (in module one.alf.spec), [1] ConversionMixin (class in one.converters) create_file_tree() (in module one.tests.util) create_new_session() (RegistrationClient method) create_schema_cache() (in module one.tests.util) create_sessions() (RegistrationClient method) CRITICAL (QC attribute)

D

dataframe() (in module one.alf.io) dataset2type() (OneAlyx method) dataset_name_parts (PureALFPath property) dataset_record_to_url() (in module one.webclient) datasets2records() (in module one.converters) DATASETS_COLUMNS (in module one.alf.cache) date (PureALFPath property) default() (in module one.params) default_cache() (in module one.alf.cache) DEFAULT_PAR (in module one.remote.globus) delete() (AlyxClient method) delete_data() (Globus method)

delete_params() (in module one.params) describe() (in module one.alf.spec) describe_dataset() (OneAlyx method) describe_revision() (OneAlyx method) dict2ref() (ConversionMixin static method) did (TestOneTagMismatch attribute) download_cache_tables() (AlyxClient method) download_file() (AlyxClient method) (DownloadClient method) (Globus method) DownloadClient (class in one.remote.base) dset (TestAlyx2Path attribute)

E

EID (TestREST attribute) eid2path() (ConversionMixin method) (OneAlyx method) eid2pid() (OneAlyx method) eid2ref() (ConversionMixin method) EID_EPHYS (TestREST attribute) EMPTY_DATASETS_FRAME (in module one.alf.cache), [1] EMPTY_SESSIONS_FRAME (in module one.alf.cache), [1] endpoints (RestSchemeCoreApi property) (RestSchemeOpenApi property) endpoints() (RestScheme method)

ensure_ISO8601() (RegistrationClient static method) EXCLUDE (RestScheme attribute) exists() (in module one.alf.io) explanation (ALFError attribute), [1] (ALFInvalid attribute) (ALFMultipleCollectionsFound attribute) (ALFMultipleObjectsFound attribute) (ALFMultipleRevisionsFound attribute) (ALFObjectNotFound attribute) (AlyxSubjectNotFound attribute) extra (PureALFPath property)

F

FAIL (QC attribute) fetch_endpoints_from_alyx() (Globus method) fid (TestOneTagMismatch attribute) field_names() (RestScheme method) fields() (RestScheme method) (RestSchemeCoreApi method) (RestSchemeOpenApi method) file_record_to_url() (in module one.webclient)

FILE_SPEC (in module one.alf.spec), [1] filter_by() (in module one.alf.io) filter_datasets() (in module one.util) filter_revision_last_before() (in module one.util) find_files() (RegistrationClient method) find_variants() (in module one.alf.io) from_df() (AlfBunch static method) FULL_SPEC (in module one.alf.spec), [1]

G

get() (AlyxClient method) (in module one.params) get_aws_access_keys() (in module one.remote.aws) get_cache_dir() (in module one.params) get_dataset_type() (in module one.registration) get_default_client() (in module one.params) get_details() (One method) (OneAlyx method)

get_file() (in module one.tests.util) get_lab_from_endpoint_id() (in module one.remote.globus) get_params_dir() (in module one.params) get_s3_allen() (in module one.remote.aws) get_s3_from_alyx() (in module one.remote.aws) get_s3_public() (in module one.remote.aws) get_s3_virtual_host() (in module one.remote.aws) Globus (class in one.remote.globus) GLOBUS_TRANSFER_SCOPE (in module one.remote.globus)

H

http_download_file() (in module one.webclient)

http_download_file_list() (in module one.webclient)

I

index_last_before() (in module one.util) is_dataset() (ALFPath method) (PureALFPath method) is_exp_ref() (ConversionMixin static method) is_folder() (in module one.remote.aws) is_logged_in (AlyxClient property) (Globus property) is_session_path() (ALFPath method) (in module one.alf.spec) (PureALFPath method)

is_uuid() (in module one.alf.spec) is_uuid_string() (in module one.alf.spec) is_valid() (in module one.alf.spec) is_valid_alf() (ALFPath method) (PureALFPath method) iter_datasets() (ALFPath method) (in module one.alf.io) iter_sessions() (in module one.alf.io)

J

json_field_delete() (AlyxClient method) json_field_remove_key() (AlyxClient method)

json_field_update() (AlyxClient method) json_field_write() (AlyxClient method)

L

lab (PureALFPath property) LazyId (class in one.util) list_aggregates() (OneAlyx method) list_collections() (One method) list_datasets() (One method) (OneAlyx method) list_endpoints() (AlyxClient method) list_revisions() (One method) list_subjects() (One method) load_aggregate() (OneAlyx method) load_cache() (One method) (OneAlyx method)

load_client_params() (in module one.remote.base) load_collection() (One method) load_dataset() (One method) load_dataset_from_id() (One method) load_datasets() (One method) load_file_content() (in module one.alf.io) load_object() (in module one.alf.io) (One method) load_tables() (in module one.alf.cache) login() (Globus method) logout() (AlyxClient method) (Globus method) ls() (Globus method)

M

make_parquet_db() (in module one.alf.cache) max_retry_attempts (AlyxClient attribute) max_retry_wait_seconds (AlyxClient attribute) merge_tables() (in module one.alf.cache) mock_http_download() (in module one.tests.util) module one one.alf one.alf.cache one.alf.exceptions one.alf.io one.alf.path one.alf.spec one.api one.converters one.params one.registration one.remote one.remote.aws one.remote.base one.remote.globus one.tests one.tests.alf one.tests.alf.test_alf_io one.tests.alf.test_alf_path one.tests.alf.test_alf_spec one.tests.alf.test_cache one.tests.remote one.tests.remote.test_aws one.tests.remote.test_base one.tests.remote.test_globus one.tests.test_alyxclient one.tests.test_alyxrest one.tests.test_converters one.tests.test_one one.tests.test_params one.tests.test_registration one.tests.util one.util one.webclient

mv() (Globus method)

N

N_THREADS (in module one.webclient), [1] namespace (PureALFPath property)

next_num_folder() (in module one.alf.io) no_cache() (in module one.webclient) NOT_SET (QC attribute)

O

object (PureALFPath property) offline (One property) one module One (class in one.api) one (TestOneAlyx attribute) (TestOneDownload attribute) (TestRegistrationClient attribute) (TestRegistrationClientNonSession attribute) ONE() (in module one.api) one.alf module one.alf.cache module one.alf.exceptions module one.alf.io module one.alf.path module one.alf.spec module one.api module one.converters module one.params module one.registration module one.remote module one.remote.aws module one.remote.base module one.remote.globus module one.tests module

one.tests.alf module one.tests.alf.test_alf_io module one.tests.alf.test_alf_path module one.tests.alf.test_alf_spec module one.tests.alf.test_cache module one.tests.remote module one.tests.remote.test_aws module one.tests.remote.test_base module one.tests.remote.test_globus module one.tests.test_alyxclient module one.tests.test_alyxrest module one.tests.test_converters module one.tests.test_one module one.tests.test_params module one.tests.test_registration module one.tests.util module one.util module one.webclient module one_path_from_dataset() (in module one.converters) OneAlyx (class in one.api)

P

parse_alf_name() (PureALFPath method) parse_alf_path() (PureALFPath method) parse_id() (in module one.util) parse_values() (in module one.converters) PASS (QC attribute) patch() (AlyxClient method) patch_tables() (in module one.alf.cache) path2eid() (ConversionMixin method) (OneAlyx method) path2record() (ConversionMixin method) path2ref() (ConversionMixin static method) path2url() (ConversionMixin method) (OneAlyx method) path_from_dataset() (in module one.converters) path_from_filerecord() (in module one.converters)

path_mock (TestBase attribute) (TestGlobus attribute) path_pattern() (in module one.alf.spec) pid2eid() (OneAlyx method) PosixALFPath (class in one.alf.path) post() (AlyxClient method) prepare_files() (RegistrationClient method) print_endpoint_info() (AlyxClient method) (RestScheme method) (RestSchemeCoreApi method) (RestSchemeOpenApi method) PureALFPath (class in one.alf.path) PurePosixALFPath (class in one.alf.path) PureWindowsALFPath (class in one.alf.path) put() (AlyxClient method)

Q

QC (class in one.alf.spec)

QC_TYPE (in module one.alf.cache), [1]

R

read_ts() (in module one.alf.io) readableALF() (in module one.alf.spec) record2path() (ConversionMixin method) record2url() (ConversionMixin method) recurse() (in module one.converters) ref2dict() (ConversionMixin static method) ref2eid() (ConversionMixin method) ref2path() (ConversionMixin method) regex() (in module one.alf.spec) register_files() (RegistrationClient method) register_session() (RegistrationClient method) register_water_administration() (RegistrationClient method) register_weight() (RegistrationClient method) RegistrationClient (class in one.registration) rel_path2url() (AlyxClient method) REL_PATH_SPEC (in module one.alf.spec), [1] rel_ses_files (TestONEParquet attribute)

rel_ses_path (TestONEParquet attribute) relative_to_lab() (PureALFPath method) relative_to_session() (PureALFPath method) remove_empty_folders() (in module one.alf.io) remove_missing_datasets() (in module one.alf.cache) remove_table_files() (in module one.alf.cache) repo (TestAWS attribute) repo_from_alyx() (DownloadClient static method) rest() (AlyxClient method) rest_schemes (AlyxClient property) rest_schemes() (in module one.tests.util) RestScheme (class in one.webclient) RestSchemeCoreApi (class in one.webclient) RestSchemeOpenApi (class in one.webclient) revision (PureALFPath property) REVISION_LAST_BEFORE (in module one.api) revisions_datasets_table() (in module one.tests.util) run_task() (Globus method)

S

s3_download_file() (in module one.remote.aws) s3_download_folder() (in module one.remote.aws) save() (in module one.params) save_cache() (One method) save_client_params() (in module one.remote.base) save_loaded_ids() (One method) save_metadata() (in module one.alf.io) save_object_npy() (in module one.alf.io) SAVE_ON_DELETE (in module one.api) search() (One method) (OneAlyx method) search_insertions() (OneAlyx method) search_terms() (One method) (OneAlyx method) sequence (PureALFPath property) ses2eid() (LazyId static method) ses2records() (in module one.converters) ses_info (TestONEParquet attribute) session_parts (PureALFPath property) session_path (TestALFFolders attribute) session_path() (PureALFPath method) session_path_short() (PureALFPath method) session_record2path() (in module one.converters) SESSION_SPEC (in module one.alf.spec), [1] SESSIONS_COLUMNS (in module one.alf.cache) set_up_env() (in module one.tests.util) setup() (DownloadClient static method) (Globus static method) (in module one.params) (One static method) (OneAlyx static method) setUp() (TestALFPath method) (TestAuthentication method) (TestBase method) (TestDefaultLogging method) (TestDownloadHTTP method) (TestFindVariants method) (TestGlobus method) (TestJsonFieldMethods method) (TestMisc method) (TestONECache method) (TestOneDownload method) (TestONEParamUtil method) (TestONEParquet method) (TestOneRemote method) (TestOneSetup method) (TestOneTagMismatch method) (TestParamSetup method) (TestRegistrationClient method) (TestRegistrationClientNonSession method) (TestRestCache method) (TestRestDocumentation method) (TestsAlf method) (TestsAlfPartsFilters method) (TestsLoadFile method) (TestsLoadFileNonStandard method) (TestThrottleBackoff method)

setup_rest_cache() (in module one.tests.util) setup_test_params() (in module one.tests.util) setUpClass() (TestALFFolders class method) (TestAWS class method) (TestBase class method) (TestConverters class method) (TestGlobus class method) (TestOneAlyx class method) (TestOnlineConverters class method) (TestRegistrationClient class method) (TestRegistrationClientNonSession class method) (TestREST class method) setUpModule() (in module one.tests.test_alyxclient) source (TestAWSPublic attribute) SPEC_DESCRIPTION (in module one.alf.spec), [1] STATUS_MAP (in module one.remote.globus) subject (PureALFPath property) (TestRegistrationClient attribute) (TestRegistrationClientNonSession attribute)

T

tag (TestRegistrationClient attribute) (TestRegistrationClientNonSession attribute) task_wait_async() (Globus method) tearDown() (TestALFErr method) (TestALFFolders method) (TestBase method) (TestGlobus method) (TestOneAlyx method) (TestONECache method) (TestOneDownload method) (TestONEParquet method) (TestOneRemote method) (TestRegistrationClientNonSession method) (TestsAlf method) (TestsAlfPartsFilters method) (TestsLoadFile method) tearDownClass() (TestALFFolders class method) (TestBase class method) (TestGlobus class method) (TestOneAlyx class method) (TestOnlineConverters class method) (TestRegistrationClient class method) (TestRegistrationClientNonSession class method) tearDownModule() (in module one.tests.test_alyxclient) temp_dir (TestRegistrationClient attribute) (TestRegistrationClientNonSession attribute) tempdir (TestALFFolders attribute) (TestAWS attribute) (TestBase attribute) (TestConverters attribute) (TestGlobus attribute) (TestOneAlyx attribute) (TestONECache attribute) (TestOneDownload attribute) test_a_token_alone_is_refused_when_the_database_is_unreachable() (TestAuthentication method) test_a_token_alone_needs_a_database_that_names_its_owner() (TestAuthentication method) test_a_token_is_never_asked_who_it_belongs_to() (TestAuthentication method) test_a_username_resolved_once_is_remembered() (TestAuthentication method) test_add_endpoint() (TestGlobusClient method) test_add_uuid() (TestALFParse method) test_ALFError() (TestALFErr method) test_alyx_advice_header() (TestMisc method) test_alyx_client_methods() (TestRestDocumentation method) test_append_list() (TestAlfBunch method) test_append_numpy() (TestAlfBunch method) test_as_globus_path() (TestGlobus method) test_auth_errors() (TestAuthentication method) test_auth_methods() (TestAuthentication method) test_authenticate_token_prompt() (TestAuthentication method) test_authenticate_with_token() (TestAuthentication method) test_authenticate_with_token_not_cached() (TestAuthentication method) test_authentication() (TestAuthentication method) test_autocomplete() (TestOneMisc method) test_backoff_with_retry_after() (TestThrottleBackoff method) test_backoff_without_retry_after() (TestThrottleBackoff method) test_cache_buildup() (TestOneRemote method) test_cache_dir_setter() (TestMisc method) test_cache_mode() (TestRestCache method) test_cache_returned_on_error() (TestRestCache method) test_caches_response() (TestRestCache method) test_channels() (TestREST method) test_check_dimensions() (TestAlfBunch method) (TestsAlf method) test_check_filesystem() (TestOneAlyx method) (TestONECache method) test_check_protected() (TestRegistrationClient method) test_check_protected_files() (TestRegistrationClientNonSession method) test_clear_cache() (TestRestCache method) test_collection_spec() (TestOneMisc method) test_constructor() (TestGlobusClient method) test_create_new_session() (TestRegistrationClient method) test_create_sessions() (TestRegistrationClient method) test_credentials() (TestAWS method) test_dataset2type() (TestOneAlyx method) test_datasets2records() (TestOnlineConverters method) test_datasets_df() (TestONEParquet method) test_decode_error_cache() (TestRestCache method) test_delete() (TestONECache method) test_delete_data() (TestGlobusClient method) test_delete_params() (TestONEParamUtil method) test_describe() (TestALFSpec method) test_describe_dataset() (TestOneAlyx method) test_describe_revision() (TestOneAlyx method) test_dict2ref() (TestConverters method) test_download_aws() (TestOneAlyx method) (TestOneDownload method) test_download_cache_tables_auth() (TestDownloadHTTP method) test_download_cache_tables_authenticates() (TestAuthentication method) test_download_creates_a_missing_target_directory() (TestDownloadHTTP method) test_download_datasets() (TestDownloadHTTP method) (TestOneDownload method) test_download_datasets_with_api() (TestDownloadHTTP method) test_download_file() (TestAWSPublic method) (TestGlobusClient method) test_download_folder() (TestAWSPublic method) test_download_folder_skips_siblings() (TestUtils method) test_download_public_dataset() (TestOneDownload method) test_dromedary() (TestALFSpec method) test_dsets_2_path() (TestAlyx2Path method) test_eid2path() (TestConverters method) (TestOnlineConverters method) test_eid2pid() (TestOnlineConverters method) test_eid2ref() (TestConverters method) test_empty() (TestJsonFieldMethods method) test_endpoint_id_root() (TestGlobusClient method) test_endpoint_path() (TestGlobusClient method) test_endpoints_docs() (TestREST method) test_ensure_alf_path() (TestALFPath method) test_ensure_ISO8601() (TestRegistrationClient method) test_exists() (TestRegistrationClient method) (TestsAlf method) test_expired_cache() (TestRestCache method) test_expiry_param() (TestRestCache method) test_fetch_endpoints_from_alyx() (TestGlobusClient method) test_filename_parts() (TestALFParse method) test_filter() (TestONECache method) test_filter_by() (TestsAlfPartsFilters method) test_filter_wildcards() (TestONECache method) test_find_files() (TestRegistrationClient method) test_folder_parts() (TestALFParse method) test_from_dataframe() (TestAlfBunch method) test_full_path_parts() (TestALFParse method) test_generic_request() (TestREST method) test_get_alf_path() (TestALFGet method) test_get_allen_s3() (TestUtils method) test_get_cache_dir() (TestONEParamUtil method) test_get_dataset_type() (TestDatasetTypes method) test_get_default_client() (TestONEParamUtil method) test_get_details() (TestONECache method) (TestOneRemote method) test_get_ibl_s3() (TestUtils method) test_get_lab_from_endpoint_id() (TestGlobus method) test_get_local_endpoint_id() (TestGlobus method) test_get_local_endpoint_paths() (TestGlobus method) test_get_params_dir() (TestONEParamUtil method) test_get_s3_from_alyx() (TestAWS method) test_get_s3_virtual_host() (TestUtils method) test_get_session_folder() (TestALFGet method) test_get_token() (TestGlobus method) test_globus_headless() (TestGlobusClient method) test_hash_ids() (TestONEParquet method) test_http_server_auth() (TestDownloadHTTP method) test_id_django_fields() (TestREST method) test_index_last_before() (TestOneMisc method) test_instantiation() (TestDefaultLogging method) (TestRegistrationClient method) test_is_dataset() (TestALFPath method) test_is_exp_ref() (TestConverters method) test_is_session_folder() (TestALFSpec method) test_is_session_path() (TestALFPath method) test_is_uuid() (TestALFSpec method) test_is_uuid_string() (TestALFSpec method) test_is_valid() (TestALFSpec method) test_is_valid_alf() (TestALFPath method) test_isdatetime() (TestALFParse method) test_iter_datasets() (TestALFFolders method) (TestALFPath method) test_iter_sessions() (TestALFFolders method) test_json_encoder() (TestMisc method) test_json_methods() (TestJsonFieldMethods method) test_key_from_url() (TestONEParamUtil method) test_LazyID() (TestOneMisc method) test_lifecycle_headers() (TestMisc method) test_list_aggregates() (TestOneAlyx method) test_list_collections() (TestONECache method) test_list_datasets() (TestONECache method) (TestOneRemote method) test_list_pk_query() (TestREST method) test_list_revisions() (TestONECache method) test_list_subjects() (TestONECache method) test_load_aggregate() (TestOneAlyx method) test_load_cache() (TestOneAlyx method) (TestONECache method) test_load_client_params() (TestBase method) test_load_collection() (TestONECache method) test_load_dataset() (TestONECache method) (TestOneRemote method) test_load_dataset_from_id() (TestONECache method) test_load_datasets() (TestONECache method) test_load_file_content() (TestsLoadFile method) test_load_object() (TestONECache method) (TestOneRemote method) (TestsAlf method) test_load_sparse_npz() (TestsLoadFileNonStandard method) test_loads_cached() (TestRestCache method) test_local_cache_setup_prompt() (TestOneSetup method) test_local_tables_only() (TestOneSetup method) test_login_logout() (TestGlobusClient method) test_ls() (TestGlobusClient method) (TestsAlf method) test_maximum_thresholds() (TestThrottleBackoff method) test_merge_cache_tables() (TestONETables method) test_metadata_columns() (TestsAlf method) test_metadata_columns_UUID() (TestsAlf method) test_mode_validation() (TestONECache method)

test_mv() (TestGlobusClient method) test_named_group() (TestALFSpec method) test_next_num_folder() (TestALFFolders method) test_next_revision() (TestRegistrationClient method) test_no_cache_context_manager() (TestMisc method) test_no_username_is_an_error_rather_than_a_prompt_loop() (TestAuthentication method) test_note_with_picture_upload() (TestREST method) test_npy_parts_and_file_filters() (TestsAlfPartsFilters method) test_offline_repr() (TestONECache method) test_one_factory() (TestOneSetup method) test_one_search() (TestONECache method) test_online_repr() (TestOneRemote method) test_padded_sequence() (TestALFParse method) test_paginated_request() (TestREST method) test_paginated_response() (TestMisc method) test_paginated_response_count_changed() (TestMisc method) test_parquet() (TestONEParquet method) test_parse() (TestONEParquet method) test_parse_alf_name() (TestALFPath method) test_parse_alf_path() (TestALFPath method) test_parse_id() (TestOneMisc method) test_parse_values() (TestWrappers method) test_parts_properties() (TestALFPath method) test_patch_params() (TestOneSetup method) test_path2eid() (TestConverters method) (TestOnlineConverters method) test_path2record() (TestConverters method) test_path2ref() (TestConverters method) test_path_pattern() (TestALFSpec method) test_patterns() (TestALFSpec method) test_pid2eid() (TestOneAlyx method) (TestOnlineConverters method) test_prepare_files() (TestRegistrationClient method) (TestRegistrationClientNonSession method) test_print_endpoint_info() (TestRestDocumentation method) test_qc_validate() (TestALFSpec method) test_read_ts() (TestsAlf method) test_readable_ALF() (TestALFSpec method) test_record2path() (TestOnlineConverters method) test_record2url() (TestOnlineConverters method) test_recurse() (TestWrappers method) test_ref2dict() (TestConverters method) test_ref2path() (TestConverters method) test_regex() (TestALFSpec method) test_register_files() (TestRegistrationClient method) (TestRegistrationClientNonSession method) test_register_session() (TestRegistrationClient method) test_register_weight() (TestRegistrationClient method) test_rel_path_parts() (TestALFParse method) test_relative_to_lab() (TestALFPath method) test_relative_to_session() (TestALFPath method) test_remove_cache_table_files() (TestONECache method) test_remove_empty_folders() (TestALFFolders method) test_remove_missing_datasets() (TestONEParquet method) test_remove_token_fields() (TestGlobus method) test_remove_uuid() (TestALFParse method) test_repo_from_alyx() (TestBase method) test_reset_cache() (TestONECache method) test_respects_user_configuration() (TestDefaultLogging method) test_rest_all_actions() (TestREST method) test_rest_endpoint_read_only() (TestREST method) test_rest_endpoint_write() (TestREST method) test_rest_schema_core_api() (TestRestDocumentation method) test_retry_after_date() (TestThrottleBackoff method) test_revision_last_before() (TestOneMisc method) test_save_cache() (TestONECache method) test_save_client_params() (TestBase method) test_save_loaded_ids() (TestONECache method) test_save_npy() (TestsAlf method) test_save_refresh_token_callback() (TestGlobusClient method) test_schema_support() (TestRestDocumentation method) test_search() (TestOneRemote method) test_search_insertions() (TestONECache method) (TestOneRemote method) test_search_terms() (TestOneRemote method) test_ses2records() (TestOnlineConverters method) test_ses2records_base_session() (TestOnlineConverters method) test_session_path() (TestALFPath method) test_session_path_parts() (TestALFParse method) test_session_path_short() (TestALFPath method) test_session_record2path() (TestAlyx2Path method) test_sessions_df() (TestONEParquet method) test_setup() (TestGlobus method) (TestGlobusClient method) (TestOneSetup method) (TestParamSetup method) test_setup_default_logging() (TestDefaultLogging method) test_setup_silent() (TestOneSetup method) test_setup_username() (TestOneSetup method) test_static_setup() (TestOneSetup method) test_tag_mismatched_file_record() (TestOneDownload method) (TestOneTagMismatch method) test_task_wait_async() (TestGlobusAsync method) test_the_api_version_is_sent_with_the_request() (TestAuthentication method) test_the_api_version_survives_every_authentication_path() (TestAuthentication method) test_to_address() (TestGlobusClient method) test_to_alf() (TestALFSpec method) test_to_dataframe_scalars() (TestAlfBunch method) test_to_dataframe_vectors() (TestAlfBunch method) test_to_eid() (TestConverters method) (TestOnlineConverters method) test_token_alone_identifies_the_user() (TestAuthentication method) test_token_username_wins_over_the_one_supplied() (TestAuthentication method) test_transfer_data() (TestGlobusClient method) test_ts2vec() (TestsAlf method) test_type2datasets() (TestOneAlyx method) test_unique() (TestFindVariants method) test_update_url_params() (TestMisc method) test_url2uri() (TestUtils method) test_url_from_path() (TestOneAlyx method) test_url_from_record() (TestOneAlyx method) test_uuid_serialize() (TestJsonFieldMethods method) test_validate_date_range() (TestOneMisc method) test_validate_file_url() (TestMisc method) test_validation_list_fields() (TestREST method) test_verify_token_checks_the_me_endpoint() (TestAuthentication method) test_verify_token_rejects_bad_token() (TestAuthentication method) test_verify_token_tolerates_unreachable_database() (TestAuthentication method) test_water_administration() (TestRegistrationClient method) test_water_restriction() (TestREST method) test_with_attribute() (TestALFPath method) test_with_collection() (TestALFPath method) test_with_date() (TestALFPath method) test_with_extension() (TestALFPath method) test_with_extra() (TestALFPath method) test_with_lab() (TestALFPath method) test_with_namespace() (TestALFPath method) test_with_object() (TestALFPath method) test_with_padded_sequence() (TestALFPath method) test_with_revision() (TestALFPath method) test_with_sequence() (TestALFPath method) test_with_subject() (TestALFPath method) test_with_timescale() (TestALFPath method) test_with_uuid() (TestALFPath method) test_without_lab() (TestALFPath method) test_without_revision() (TestALFGet method) (TestALFPath method) test_without_uuid() (TestALFPath method) TestAlfBunch (class in one.tests.alf.test_alf_io) TestALFErr (class in one.tests.alf.test_alf_spec) TestALFFolders (class in one.tests.alf.test_alf_io) TestALFGet (class in one.tests.alf.test_alf_path) TestALFParse (class in one.tests.alf.test_alf_path) TestALFPath (class in one.tests.alf.test_alf_path) TestALFSpec (class in one.tests.alf.test_alf_spec) TestAlyx2Path (class in one.tests.test_converters) TestAuthentication (class in one.tests.test_alyxclient) TestAWS (class in one.tests.remote.test_aws) TestAWSPublic (class in one.tests.remote.test_aws) TestBase (class in one.tests.remote.test_base) TestConverters (class in one.tests.test_converters) TestDatasetTypes (class in one.tests.test_registration) TestDefaultLogging (class in one.tests.test_one) TestDownloadHTTP (class in one.tests.test_alyxclient) TestFindVariants (class in one.tests.alf.test_alf_io) TestGlobus (class in one.tests.remote.test_globus) TestGlobusAsync (class in one.tests.remote.test_globus) TestGlobusClient (class in one.tests.remote.test_globus) TestJsonFieldMethods (class in one.tests.test_alyxclient) TestMisc (class in one.tests.test_alyxclient) TestOneAlyx (class in one.tests.test_one) TestONECache (class in one.tests.test_one) TestOneDownload (class in one.tests.test_one) TestOneMisc (class in one.tests.test_one) TestONEParamUtil (class in one.tests.test_params) TestONEParquet (class in one.tests.alf.test_cache) TestOneRemote (class in one.tests.test_one) TestOneSetup (class in one.tests.test_one) TestONETables (class in one.tests.alf.test_cache) TestOneTagMismatch (class in one.tests.test_one) TestOnlineConverters (class in one.tests.test_converters) TestParamSetup (class in one.tests.test_params) TestRegistrationClient (class in one.tests.test_registration) TestRegistrationClientNonSession (class in one.tests.test_registration) TestREST (class in one.tests.test_alyxrest) TestRestCache (class in one.tests.test_alyxclient) TestRestDocumentation (class in one.tests.test_alyxclient) tests_db() (TestONEParquet method) TestsAlf (class in one.tests.alf.test_alf_io) TestsAlfPartsFilters (class in one.tests.alf.test_alf_io) TestsLoadFile (class in one.tests.alf.test_alf_io) TestsLoadFileNonStandard (class in one.tests.alf.test_alf_io) TestThrottleBackoff (class in one.tests.test_alyxclient) TestUtils (class in one.tests.remote.test_aws) TestWrappers (class in one.tests.test_converters) timescale (PureALFPath property) to_address() (DownloadClient method) (Globus method) to_alf() (in module one.alf.spec) to_df() (AlfBunch method) to_eid() (ConversionMixin method) token_verify_timeout (AlyxClient attribute) transfer_data() (Globus method) ts2vec() (in module one.alf.io) type2datasets() (OneAlyx method)

U

update_url_params() (in module one.webclient) url() (RestScheme method) (RestSchemeCoreApi method) (RestSchemeOpenApi method)

url2uri() (in module one.remote.aws) user (AlyxClient attribute) uuid_filenames (One attribute)

V

validate() (QC static method)

validate_date_range() (in module one.util) validate_endpoint_action() (in module one.webclient)

W

WARNING (QC attribute) WindowsALFPath (class in one.alf.path) with_attribute() (PureALFPath method) with_collection() (PureALFPath method) with_date() (PureALFPath method) with_extension() (PureALFPath method) with_extra() (PureALFPath method) with_lab() (PureALFPath method) with_namespace() (PureALFPath method)

with_object() (PureALFPath method) with_padded_sequence() (PureALFPath method) with_revision() (PureALFPath method) with_sequence() (PureALFPath method) with_subject() (PureALFPath method) with_timescale() (PureALFPath method) with_uuid() (PureALFPath method) without_lab() (PureALFPath method) without_revision() (PureALFPath method) without_uuid() (PureALFPath method)