ibllib.tests.test_spikeglx

Classes

TestSpikeGLX_glob_ephys	Creates mock acquisition folders architecture (omitting metadata files): ├── 3A │ ├── imec0 │ │ ├── sync_testing_g0_t0.imec0.ap.bin │ │ └── sync_testing_g0_t0.imec0.lf.bin │ └── imec1 │ ├── sync_testing_g0_t0.imec1.ap.bin │ └── sync_testing_g0_t0.imec1.lf.bin └── 3B ├── sync_testing_g0_t0.nidq.bin ├── imec0 │ ├── sync_testing_g0_t0.imec0.ap.bin │ └── sync_testing_g0_t0.imec0.lf.bin └── imec1 ├── sync_testing_g0_t0.imec1.ap.bin └── sync_testing_g0_t0.imec1.lf.bin
TestSpikeGLX_hardwareInfo
TestsBasicReader	Tests the basic usage where there is a flat binary and no metadata associated
TestsSpikeGLX_Meta
TestsSpikeGLX_compress

class TestSpikeGLX_hardwareInfo(methodName='runTest')

Bases: unittest.case.TestCase

setUp() → None

Hook method for setting up the test fixture before exercising it.

test_get_wiring()

test_get_channel_map()

test_default_values()

class TestSpikeGLX_glob_ephys(methodName='runTest')

Bases: unittest.case.TestCase

Creates mock acquisition folders architecture (omitting metadata files): ├── 3A │ ├── imec0 │ │ ├── sync_testing_g0_t0.imec0.ap.bin │ │ └── sync_testing_g0_t0.imec0.lf.bin │ └── imec1 │ ├── sync_testing_g0_t0.imec1.ap.bin │ └── sync_testing_g0_t0.imec1.lf.bin └── 3B

├── sync_testing_g0_t0.nidq.bin ├── imec0 │ ├── sync_testing_g0_t0.imec0.ap.bin │ └── sync_testing_g0_t0.imec0.lf.bin └── imec1

├── sync_testing_g0_t0.imec1.ap.bin └── sync_testing_g0_t0.imec1.lf.bin

setUp()

Hook method for setting up the test fixture before exercising it.

test_glob_ephys()

tearDown()

Hook method for deconstructing the test fixture after testing it.

class TestsSpikeGLX_compress(methodName='runTest')

Bases: unittest.case.TestCase

setUp()

Hook method for setting up the test fixture before exercising it.

tearDown()

Hook method for deconstructing the test fixture after testing it.

test_read_slices()

test_compress()

class TestsSpikeGLX_Meta(methodName='runTest')

Bases: unittest.case.TestCase

setUp()

Hook method for setting up the test fixture before exercising it.

tearDown() → None

Hook method for deconstructing the test fixture after testing it.

test_fix_meta_file()

test_read_corrupt()

test_read_nidq()

test_read_3A()

test_read_3B()

test_read_NP21()

test_read_NP24()

test_check_ephys_file()

assert_read_glx(tglx)

testGetSerialNumber()

testGetRevisionAndType()

testReadChannelGainAPLF()

testGetAnalogSyncIndex()

testReadChannelGainNIDQ()

testReadChannelMap()

testSplitSyncTrace()

testWriteMetaData()

testSaveSubset()

class TestsBasicReader(methodName='runTest')

Bases: unittest.case.TestCase

Tests the basic usage where there is a flat binary and no metadata associated

test_read_flat_binary_float32()

test_read_flat_binary_int16()